Syncrip facilitates porcine parvovirus viral dna replication through the alternative splicing of ns1 mrna to promote ns2 mrna formation


Over‑expression of SYNCRIP leads to the reduction of NS1



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PPV.NS

Over‑expression of SYNCRIP leads to the reduction of NS1 
mRNA and protein expression
To detect whether the interaction between SYN-
CRIP and NS1 mRNA will affect the expression of 
NS1, we established a cell line stably expressing 
pCDNA-His-SYNCRIP, named as PK-15
SYNCRIP
(Fig-
ures 
5
A, B). The cell viability assay shows that the 
viability of overexpressing SYNCRIP cells was not 
significantly different from PK-15 or PK-15
V
(Fig-
ure 
5
C). When recombinant plasmids (pEGFP-NS1, 
pEGFP-NS2, pEGFP-VP1 and pEGFP-VP2) express-
ing NS1, NS2, VP1, or VP2 were transfected into 
PK-15
SYNCRIP
, PK-15 or PK-15
V
cells, the level of NS1 
protein decreased in PK-15
SYNCRIP
cells, while the 
protein level of VP1, VP2 or NS2 were not changed
compared to those in PK-15 or PK-15
V
control cells 
(Figure 
5
D). We further tested whether transient 
overexpression of SYNCRIP could also decrease NS1 
levels, and found that SYNCRIP overexpression did 
decrease the amount of NS1 protein in PK-15 cells 
(Figure 
5
E). This was consistent with the results that 
the expression of NS1 decreased gradually in PK-15 
cells or ST cells, with the increase of the expression 
of SYNCRIP plasmid (Figures 
5
F, G). Consistently, we 
noted that NS1 mRNA was significantly decreased in 
the cells that overexpressed SYNCRIP compared to 
the cells without overexpression (Figures 
5
H, I), sug-
gesting that SYNCRIP could regulate NS1 expression 
at the mRNA and protein levels.
SYNCRIP regulates the ratio of NS1 mRNA to NS2 mRNA 
and the replication of PPV
To investigate the function of SYNCRIP in the PPV 
life cycle, we first assessed whether SYNCRIP deple-
tion affected viral entry by examining the localiza-
tion of viral capsid protein (VP) in SYNCRIP-depleted 
cells after PPV infection in the presence of the trans-
lation inhibitor cycloheximide. Compared to the con-
trol, SYNCRIP knockout did not decrease nuclear VP 
staining at 2 hpi (Figure 
6
A), indicating that SYNCRIP 
deficiency did not affect PPV entry. To investigate the 
potential effect on the splice of mRNA, the mRNA lev-
els of NS2 and NS1 were measured by qPCR as shown 
in Figure 
6
B. Indeed, the ratio of NS2 to NS1 mRNA 
decreased in PPV-infected SYNCRIP depleted cells 
(Figure 
6
C). As NS2 mRNA, NS3 mRNA was also 
derived from the alternative splicing of NS1 mRNA seg-
ment, but we did not find a significant difference in the 
ratio of NS3 to NS1 mRNA among PK-15, PK
SYNCRIP+/+
and PK
SYNCRIP−/−
cells (Figure 
6
D). However, for 
another viral mRNA segment, VP mRNA, which 
could generate VP1 and VP2 mRNA through alterna-
tive splicing, no differences were observed between the 
control and SYNCRIP depleted cells in the ratio of VP2 
to VP1 mRNA (Figure 
6
E). Taken together, these find-
ings revealed that SYNCRIP could regulate the produc-
tion of NS2 mRNA through alternative splicing of NS1 
mRNA.
To further determine the role of NS2 in PPV rep-
lication, we used PPV infectious clone Y-PPV as the 
operating platform to construct the NS2 mutant strain 
using the overlap technique for site-directed mutagen-
esis (Figure 
6
F), and further observed whether NS2 
mutant could package into virion by transmission elec-
tron microscopy. The results show that the NS2 mutant 
could package into virion (Figure 
6
G), but the NS2 
mutant replication rate significantly decreased com-
pared to parental PPV (Figure 
6
H). To confirm whether 
SYNCRIP knockout decreased viral DNA replication 
via inhibition of the NS2 protein, we tested the relative 
viral titer of PPV or Y-PPV
NS2−
in PK-15 cells and SYN-
CRIP deficient cells depending on whether they express 
NS2 or not via infection with NS2 protein expressing 
lentivirus. The results show that NS2 protein comple-
mentation significantly increased PPV production in 
PK-15 cells infected by Y-PPV
NS2−
(Figure 
6
I, compare 
lane 2 and 3). Similarly, NS2 protein complementa-
tion also significantly increased PPV production in 
Y-PPV
NS2
-infected PK-15
SYNCRIP−/−
cells (Figure 
6
I, 
compare lane 5 and 7). Meanwhile, we noted that PPV 
replication levels were reduced in Y-PPV
NS2−
infected 
PK-15 cells, PPV or Y-PPV
NS2
-infected PK-15
SYNCRIP−/−
cells, but did not show a significant difference among 
these three cells (Figure 
6
I, compare lane 2, 4 and 5). 
Similarly, PPV replication levels did not show a signifi-
cant difference among Y-PPV
NS2
-infected PK-15 cells, 
PPV or Y-PPV
NS2
-infected PK-15
SYNCRIP−/−
cells when 
these cells exogenously expressed NS2 protein (Fig-
ure 
6
I, compare lane 3, 6 and 7). However, PPV repli-
cation levels were higher in Y-PPV
NS2
-infected PK-15 
cells, PPV or Y-PPV
NS2
-infected PK-15
SYNCRIP−/−
cells 
when these cells exogenously expressed NS2 protein 
as compared to those in these cells without NS2 exog-
enous expression (Figure 
6
I). Taken together, these 
results confirm that SYNCRIP plays an important 


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Chen et al. Vet Res (2021) 52:73 

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